Research Article |
Corresponding author: Martin Fikáček ( mfikacek@gmail.com ) Academic editor: Matthias Seidel
© 2024 Fang-Shuo Hu, Emmanuel Arriaga-Varela, Gabriel Biffi, Ladislav Bocák, Petr Bulirsch, Albert František Damaška, Johannes Frisch, Jiří Hájek, Peter Hlaváč, Bin-Hong Ho, Yu-Hsiang Ho, Yun Hsiao, Josef Jelínek, Jan Klimaszewski, Robin Kundrata, Ivan Löbl, György Makranczy, Keita Matsumoto, Guan-Jie Phang, Enrico Ruzzier, Michael Schülke, Zdeněk Švec, Dmitry Telnov, Wei-Zhe Tseng, Lan-Wei Yeh, My-Hanh Le, Martin Fikáček.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Hu F-S, Arriaga-Varela E, Biffi G, Bocák L, Bulirsch P, Damaška AF, Frisch J, Hájek J, Hlaváč P, Ho B-H, Ho Y-H, Hsiao Y, Jelínek J, Klimaszewski J, Kundrata R, Löbl I, Makranczy G, Matsumoto K, Phang G-J, Ruzzier E, Schülke M, Švec Z, Telnov D, Tseng W-Z, Yeh L-W, Le M-H, Fikáček M (2024) Forest leaf litter beetles of Taiwan: first DNA barcodes and first insight into the fauna. Deutsche Entomologische Zeitschrift 71(1): 17-47. https://doi.org/10.3897/dez.71.112278
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We report the publication of 953 DNA barcodes of forest leaf litter beetles from central Taiwan, in total representing 334 species of 36 beetle families. This is the first bulk of data from the Taiwanese Leaf Litter beetles project focused on uncovering the under-explored diversity of leaf litter beetles across Taiwan. Based on these data, we provide the first records of the following taxa for Taiwan: family Sphindidae (genus Aspidiphorus Ziegler, 1821); tribes Trichonychini, Ctenistini, and Bythinoplectini (all Staphylinidae: Pselaphinae); genera Gyrelon Hinton, 1942, Thyroderus Sharp, 1885, Cautomus Sharp, 1885 (all Cerylonidae), Dermatohomoeus Hlisnikovský, 1963 (Leiodidae), Paraploderus Herman, 1970 (Staphylinidae: Oxytelinae), Thinocharis Kraatz, 1859 (Staphylinidae: Paederinae), Cephennodes Reitter, 1884, Napoconnus Franz, 1957 (both Staphylinidae: Scydmaeninae), Bicava Belon, 1884 (Latridiidae), Otibazo Morimoto, 1961, Seleuca Pascoe, 1871 and Acallinus Morimoto, 1962 (all Curculionidae); species Oodes (Lachnocrepis) japonicus (Bates, 1873) (Carabidae: Licininae), Drusilla obliqua (Bernhauer, 1916) (Staphylinidae: Aleocharinae) and Coccotrypes advena Blandford, 1894 (Curculionidae: Scolytinae). The records of Anapleus Horn, 1873 (Histeridae) and Batraxis Reitter, 1882 (Staphylinidae: Pselaphinae) have been confirmed. The male of Sivacrypticus taiwanicus Kaszab, 1964 (Archeocrypticidae) is described for the first time. Gyrelon jenpani Hu, Fikáček & Matsumoto, sp. nov. (Cerylonidae) is described, illustrated, and compared with related species. DNA barcodes associated larvae of 42 species with adults, we are concisely illustrating some of these: Oodes japonicus, Perigona cf. nigriceps Dejean, 1831 (both Carabidae), Ptilodactyla sp. (Ptilodactylidae), Maltypus ryukyuanus Wittmer, 1970 (Cantharidae), Drusilla obliqua, Myrmecocephalus brevisulcus (Pace, 2008), Diochus sp., Mimopinophilus sp. (all Staphylinidae), Stelidota multiguttata Reitter, 1877, Lasiodites inaequalis (Grouvelle, 1914) (both Nitidulidae), Lagria scutellaris Pic, 1910, and Anaedus spinicornis Kaszab, 1973 (both Tenebrionidae). We also report the first cases of Rickettsia infections in Scydmaeninae and Pselaphinae. All data (sequences, metadata, and voucher photos) are made public in BOLD database and in a Zenodo Archive.
Coleoptera, DNA barcoding, new record, new species, Oxford Nanopore
Forest leaf litter, especially in tropical regions, is recognized as a habitat comparable to coral reefs by its ability to support extremely diverse faunas (
DNA-based tools, including DNA barcoding, have been advocated to overcome the above problems referred to as ‘the taxonomic impediment’ (e.g.,
Taiwan, a small island located in the western Pacific, lies at the intersection of the Oriental and Palaearctic biogeographical regions, which results in a rich diversity of fauna from both areas. Among the diverse insect orders found on the island, beetles (Coleoptera) stand out with an impressive number of recorded species. Taiwan is home to more than 119 families and 7711 species of beetles (
In this study, we are announcing the start of the Taiwanese Leaf Litter Beetles Barcoding project that aims at building an expert-identified DNA barcoding library of beetles inhabiting leaf litter in Taiwan. Our goals are (1) to initiate an extensive study of Taiwanese leaf litter beetles across all taxonomic groups, (2) to document the diversity of Taiwanese leaf litter beetles, including endemic and alien species, and (3) to provide a reliable tool for a quick identification facilitating the studies of biology of these beetles. Here, we are publishing the first set of DNA barcodes and the photographs of the sequenced vouchers and present the first taxonomic results: a description of a new species of Cerylonidae, the description of a male of the Taiwan-endemic species of Archeocrypticidae, and several newly recorded taxa. Since DNA barcodes associated many larvae from our samples with adults, we also provide detailed photos of some of them.
In this paper, we present the complete data (DNA barcodes, species identification, voucher photographs) of the beetle samples from the Huisun Forest Reserve (Nantou County, central Taiwan) collected from 2019 to 2021 (20 samples in total at 5 different sites at altitudes of 700–1100 m). Further samples are collected continuously from all over Taiwan: from 2021 to July 2023, we accumulated 85 additional samples, of which 27 are in the progress of barcoding (DNA barcodes are already available, but identifications and voucher photos need to be completed) and remaining samples as well as those collected in the future will be gradually processed as well (Fig.
Taiwanese Leaf Litter Beetle Project: summary of the current status. A. Map of the samples collected in 2019–2023 (the complete data are published here for the Huisun Forest Reserve); B–D. Voucher collection kept in the Insect Diversity Lab, the National Sun Yatsen University, Kaohsiung, Taiwan: all vouchers and duplicates are available for study by specialists.
Samples were collected with the help of a sifter with a 5 mm grid. Leaf litter was collected from suitable places where it accumulates and keeps moisture. The final volume of each sample varied between 3 and 6 liters of sifted material. We originally sampled 6 liters of sifted material, but this amount was found to be too large and hence the sampling protocol was subsequently updated to (at least) 3 liters of sifted material per sample; this updated protocol is followed for all samples collected from 2022 on. Beetles were extracted using portable Winkler extractors for 3 days, leaf litter was mixed twice a day to facilitate beetle extractions (
Most specimens were extracted using the HotSHOT protocol (
For sequencing of most samples, we used the Oxford Nanopore R9 Flongle flow cells; the only exception is the samples collected in 2019 that were sequenced using the usual Sanger protocol in Macrogene Europe. For ONT sequencing, we pooled samples from 3–4 plates into each library; 3 μl of each PCR product was used. The pooled mix was cleaned up using AMPure XP magnetic beads (Beckman Coulter, USA), typically using 500 μl of pooled PCR products and 500 μl of beads (1X ratio), using the standard protocol, but with three instead of two washes with 1 ml of 70% ethanol. The amount of DNA in the purified pooled sample was measured by Qubit (Thermo Fisher Scientific, USA). For the final library, we used 200 ng of DNA in total and the ONT Ligation Sequencing Kit SQK-LSK109. NEBNext Ultra II End repair/dA-tailing Module (New England BioLabs, Inc.) was used to repair DNA end and ligate A-tails, AMX adaptors provided in ONT Sequencing Kit were ligated using NEBNext Quick Ligation Module (New England BioLabs, Inc.). Fragment size selection was done using the short fragment buffer (SFB) from the ONT Ligation Kit, combined with AMPure XP magnetic beads. The final 30 μl library consisted of 5 μl of DNA, 15 μl of SQB buffer, and 10 μl of LB buffer (both from the ONT Sequencing Kit). Sequencing was performed using MinKNOW software, for 24 to 48 hours based on the sequencing statistics. The base calling was performed subsequently in Guppy v4.0.11 software (Oxford Nanopore Technologies). For detailed protocols used, see
We used ONTbarcoder software (
We implied three steps of the quality control of the resulting consensus sequences. Parts of the contaminations, especially by bacteria (Wolbachia, Rickettsia, etc.) or phylogenetically distant animal phyla (e.g., nematodes) were easy to recognize as exceptionally long branches not grouping with the rest of the beetles in the maximum likelihood tree constructed in MEGA v10.2.5 (
We grouped sequences into species candidates (OTU, operational taxonomic units) by constructing the maximum likelihood tree in MEGA (
All DNA barcodes which are completely processed at the moment, and the photographs of the vouchers, have been submitted to the Barcode of Life Database (BOLD;
Vouchers of all sequenced specimens are deposited in the Laboratory of Insect Diversity, Department of Biological Sciences, National Sun Yat-sen University, Kaohsiung, Taiwan (Fig.
Specimens examined in detail for taxonomy or morphology are deposited in the following collections:
BHHC coll. Bin-Hong Ho, Taipei, Taiwan;
FSHC coll. Fang-Shuo Hu, Luodong, Yilan County, Taiwan;
NMNS National Museum of Natural Sciences, Taichung, Taiwan (B.-C. Lai, J.-F. Tsai);
ZSPC coll. Zdeněk Švec, Praha, Czech Republic.
The currently released dataset is based on a total of 4629 beetle specimens collected at five sites in the Huisun Recreation Forest Area in 2019–2021 (20 samples in total). 903 specimens were larvae (19.5%); the proportion of larvae varied strongly among samples (7–36% of all specimens). In total, we extracted DNA from 1131 specimens, and obtained good-quality non-contaminated DNA barcodes for 947 of them (84%). Based on the current identification, this material represents 328 species candidates (OTUs). In most cases, the DNA-based species delimitation corresponds to that based on morphology. In a few cases, the DNA-based and morphology-based identifications are in conflict (e.g., Stenasthetus nomurai, Lederina sp., Coccotrypes papuanus), with DNA indicating several cryptic species within the morphology-based species. We do not intend here to solve these cases as they will require a more diverse geographic and gene sampling. Sequenced specimens represent 36 beetle families, of which Staphylinidae are the most diverse (152 species), followed by Curculionidae (30 species), and Tenebrionidae (23 species). Staphylinidae were represented by 14 subfamilies, with Scydmaeninae (36 species), Pselaphinae (29 species) and Aleocharinae (27 species) being the most species-diverse. Larvae were associated with adults for 42 species (12.6%) belonging to 12 families. Sixty-one species (18.2%) belonging to 13 families were collected only in larval stage; they mostly belong to lineages with free-living adults (Cantharidae, Chrysomelidae, Elateridae, Lampyridae, Lycidae, Meloidae, Mordellidae, Phalacridae, Prionoceridae, Ptilodactylidae, Tenebrionidae). Eleven species were collected as accidental catches of groups not living in leaf litter (Cerambycidae, Cleridae, Melandryidae, and Zopheridae). The summary of the material from the Huisun Forest Recreation area sequenced and published here is provided in Table
Summary of the dataset published here, based on 20 samples collected in the Huisun Recreation Forest area in 2019–2021.
Family | Sequences | Species: total | Species: larvae only | Species: larvae+adults | Non-arthropod contaminations |
---|---|---|---|---|---|
Anthicidae | 2 | 2 | – | – | – |
Archeocrypticidae | 2 | 1 | – | – | – |
Bothrideridae | 1 | 1 | – | – | – |
Cantharidae | 13 | 5 | 4 | 1 | – |
Carabidae | 49 | 12 | – | 3 | – |
Cerambycidae | 1 | 1 | – | – | – |
Cerylonidae | 7 | 4 | – | – | – |
Chrysomelidae | 34 | 17 | 11 | 1 | – |
Cleridae | 1 | 1 | – | – | – |
Coccinellidae | 2 | 2 | – | – | – |
Corylophidae | 6 | 2 | – | – | Rickettsia |
Curculionidae | 66 | 30 | 1 | – | Rickettsia |
Discolomatidae | 12 | 2 | – | 1 | – |
Elateridae | 15 | 9 | 6 | – | – |
Endomychidae | 7 | 5 | – | 1 | – |
Erotylidae | 11 | 3 | – | – | – |
Histeridae | 4 | 4 | 1 | – | Wolbachia |
Hydrophilidae | 20 | 4 | – | – | – |
Lampyridae | 11 | 6 | 6 | – | – |
Latridiidae | 8 | 2 | – | – | – |
Leiodidae | 41 | 6 | – | 2 | – |
Lycidae | 35 | 10 | 10 | 1 | – |
Melandryidae | 19 | 1 | – | – | – |
Meloidae | 1 | 1 | 1 | – | – |
Nitidulidae | 16 | 3 | – | 2 | Amoebozoa, oomycetes, Nematoda |
Phalacridae | 1 | 1 | 1 | – | – |
Prionoceridae | 3 | 1 | 1 | – | – |
Ptiliidae | 18 | 8 | – | – | – |
Ptilodactylidae | 2 | 1 | – | 1 | – |
Ptinidae | 2 | 1 | – | – | – |
Scarabaeidae | 8 | 3 | – | 1 | – |
Scraptiidae | 4 | 1 | – | 1 | – |
Sphindidae | 2 | 2 | – | – | – |
Staphylinidae | 449 | 152 | 6 | 24 | Rickettsia, Wolbachia |
Tenebrionidae | 72 | 23 | 13 | 4 | |
Zopheridae | 2 | 1 | – | – | – |
In a few cases, we obtained sequences of other organisms than beetles, including bacteria such as Rickettsia and Wolbachia. Previous studies have reported a few cases of Rickettsia infection in beetles (
Species descriptions or redescriptions
The identification of the species barcoded so far revealed a significant number of species which may be new to science or are improperly characterized in the original descriptions. The taxonomic work on most of these species is in progress by individual specialists, several species have been already described elsewhere (Scaphobaeocera insinuata:
Cerylonidae
Holotype
: male (NMNS): ‘Taiwan: Nantou County, Huisun Forest Reserve, track to Xiaochushan Mt., 24.0826139°N, 121.03115869°E, 1050 m, 4.v.2019, Damaška, Fikáček, Hu & Liu lgt., 2019-TW15’ (DNA voucher: HS2004). Paratypes: 1 male (NMNS): Taiwan: Nantou County, Huisun Forest Reserve, track to Xiaochushan Mt., 24.0744602°N, 121.0366337°E, 1150 m, 11.x.2020, FS Hu & YJ Chen lgt., old overgrown secondary forest on the slope, sparse understory vegetation: sifting of leaf litter accumulations (DNA voucher: 20-10HS506); 1 male (
The new species can be easily recognized from G. rugosus (Ślipiński, 1982) from southern China by the presence of both coarse and smaller punctures on the pronotum (only small and strongly elongated punctures are present in G. rugosus). The new species can be recognized from G. mila Hinton, 1942 (Sarawak) and G. sumatrensis Dajoz, 1974 (Sumatra) by the following characters: (1) metaventrite with punctures on the anterolateral portion much larger than posterolaterally (in contrast to small widely separated punctures in both latter species), (2) abdominal ventrite 1 with coarse punctures anteriorly and minute ones in the transverse row (with all punctures moderately large and widely spaced in both latter species), (3) transverse rows on abdominal ventrites 2–5 consisting of minute punctures (moderately large punctures in both latter species). The new species differs from G. compactus Dajoz, 1979 from Singapore by (1) the presence of 8 elytral series (7 in G. compactus), (2) the serially arranged minute seriferous punctures on elytral intervals 1–2 (with irregularly arranged setiferous punctures in G. compactus), and (3) the parallel-sided posterolateral margins of the pronotum (posteriorly converging in G. compactus). The comparison is based on the examination of the holotype of G. mila and two non-type specimens of G. sumatrensis in coll.
Body widely oval, body length 2.8–3.2 mm (holotype: 3.2 mm), body width 1.7–1.8 mm (holotype: 1.8 mm) (n=5 including holotype). Dorsal and ventral coloration dark reddish brown to black, legs and antennae brown to reddish brown, all body parts bearing yellowish erect setae.
Head relatively small, eyes moderately large, globular; frons with several moderately large punctures, each bearing erect seta, interstices smooth; clypeus weakly concave on anterior margin, dorsal surface bearing many erect setae. Antenna robust, with 11 antennomeres including the 2-segmented club; antennomeres gradually widening from base to apex; antennomere with microsculptures surface, bearing moderately dense erect setae; antennal club covered by dense short setation and moderately dense set of long erect setae; apex of antennal club bluntly pointed. Mentum small, subtriangular, strongly narrowing anteriad. Apical maxillary and labial palpomeres much narrower than the subapical ones.
Thorax. Pronotum subquadratic, nearly parallel-sided in posterior half, strongly narrowing in anterior half; median part of pronotum with elevated longitudinal ridge. Posterior corners nearly rectangular. Pronotal surface with large irregularly circular or oval punctures, each puncture bearing an erect seta; punctures getting smaller in posterolateral direction. Median part of pronotum lacking punctures, surface between punctures micropunctate. Prosternum widely rectangular, smooth, with coarse deep punctures; prosternal process wide, variable in shape, concave to weakly or strongly trifid posteriorly. Procoxal cavities widely separated, antennal grooves moderately wide, hypomeron with coarse punctures similar to those on prosternum. Mesoventrite anteriorly with a series of longitudinal ridges; surface microsculptured. Mesocoxal cavities widely separated by metaventral process. Each elytron with eight slightly irregular longitudinal series of punctures; serial punctures rounded, lacking setae; additional short series of coarse shallow punctures present anteriorly along elytral side; intervals flat dorsally, slightly convex laterally, smooth, each with a series of widely spaced minute punctures, each bearing erect seta; epipleuron present throughout elytral length, wide anteriorly, gradually narrowing posteriad. Scutellar shield widely triangular. Metaventral process with a narrow median projection of variable shape. Metaventrite flat mesally, lateral portions with large closely adjacent punctures along posterior margin of mesocoxal cavities, otherwise with relatively small and widely separated punctures, each bearing a decumbent seta; interstices with mesh-like microsculpture. Metathoracic wings absent.
Abdomen with 5 visible ventrites, ventrite 1 with a row of large closely adjacent punctures along anterolateral margin, posterior part with a transverse series of minute punctures, each with a decumbent seta. Ventrites 2–5 each with a transverse series of minute punctures, each bearing a decumbent seta. Interstices of all ventrites with fine mesh-like microsculpture. Ventrite 5 sexually dimorphic, with posterior margin nearly smooth in ventral view in male (finely crenulate in posteroventral view), and strongly crenulate in female (with a longitudinally ridged bar situated below apical part of elytral epipleuron).
Legs long and robust. Coxae and trochanters of all three pairs relatively small, coxa subglobular, trochanter subconical. Femora conical, with sparse erect setation, surface with mesh-like microsculpture. Tibiae flat, widening from base to apex, slightly more expanded in apical third, apical part with moderately dense erect setation; apical part of protibiae with an area of dense yellowish hair-like setae mesally. Tarsi with 4 tarsomeres, tarsomere 1 long and thick with dense long setae, tarsomeres 2–3 short, tarsomere 4 the longest.
Male genitalia. Aedeagus 1 mm long, simple, rod-like, without parameres, slightly widened at mid-length, rounded at apex.
The species is dedicated to Dr. Jen-Pan Huang (Biodiversity Center, Academia Sinica, Taipei) as thanks for all his support of this project, including the possibility to work in his lab and for numerous inspiring discussions about evolution, diversity, and beetles.
The species is so far only known from the type locality in central Taiwan.
Most previous studies use the form of the dorsal punctation and the shape of the prosternal process as the main diagnostic characters. Despite examining a few specimens only, we found both characters, especially the shape of the prosternal process, individually variable and/or dependent on the precise position of observation. The prosternal processes illustrated in Fig.
Gyrelon jenpani sp. nov. (Cerylonidae). A, B. Habitus (A. Dorsal view, female; B. Ventral view, male); C. Tegmen of the aedeagus; D–F. Variability of the shape of the prosternal process and metaventral process (D, E. Males; F. Female). Last abdominal ventrite in ventral and postero-ventral views (G. Male; H. Female); I. Maximum likelihood tree based on cox1 barcodes of the sequenced Cerylonidae specimens.
Archeocrypticidae
Sivacrypticus taiwanicus Kaszab, 1964
Fig.
Type material examined. Holotype: female (HNMB): ‘Formosa, Sauter’, ‘Pilam, 908.II’. We have compared our specimens with the photos of the holotype provided to us by Gy. Makranczy in May 2023 (photos are available in the Zenodo Archive under https://doi.org/10.5281/zenodo.10069183).
New material examined. 1 male (NMNS): Taiwan: Nantou County, Huisun Forest Reserve, beginning of Wading trail, 24.0892139°N, 121.0297836°E, 700 wm, 17.viii.2021, M. Fikáček & WR. Liang, stony disturbed forest on the slope, small leaf accumulations (DNA voucher: 21-08HS169); 1 unsexed specimen (
Description of male genitalia. Male genitalia 1 mm long. Median lobe thin, strongly bent in the lateral view, with a plate-like expansion on the apex. Tegmen small, freely movable along the median lobe; parameres in lateral view narrowly elongated, pointed at apex and moderately pubescent, in dorsal view plate-like, with a small indentation on lateral margin. Sperm pump present, large, bottle-like, with slightly coiled distal ductus.
Comparison with the holotype. Our specimens correspond to the holotype by all diagnostic characters, including body proportions, the coarse and complete series of punctures on elytra, the double-sized punctation on the pronotum, and the shape of the lateral pronotal margin. On the first view, the specimen in Fig.
Sivacrypticus taiwanicus Kaszab, 1964 (Archeocrypticidae). A–C. Habitus (A. Dorsal; B. Lateral; C. Ventral); D. Abdominal ventrites, male; E–H. Male genitalia (E. Median lobe and the sperm pump, lateral view; F. Median lobe and parameres, lateral view; G. Detail of median lobe and parameres, lateral view; H. Detail of parameres, dorsal view).
Comparison with other species. The previously unknown male of S. taiwanicus allows us to compare the male genitalia of the species (type species of Sivacrypticus) with those illustrated for other species of the genus. The male genitalia of S. taiwanicus are very distinct from the genitalia of most described species by (1) small tegmen, (2) strongly elongated median lobe, and (3) strongly expanded parameres in dorsal view. Its genitalia are, however, very similar to those of S. philippinus Merkl, 1988 from Luzon (Manila), but clearly differ from them by the apical expansion of the median lobe in lateral view, and in a less lobate shape of the parameres in dorsal view.
Distribution. The species was described from ‘Pilam’ (= Beinan township, Taitung County, southern Taiwan). The sequenced specimens examined by us are from lowland to lower montane forest in cenrtal Taiwan (Taichung and Nantou Counties), indicating that the species is likely widespread in lowland and lower montane forests at least in central and southern Taiwan.
New records for Taiwan
Since the leaf litter fauna of Taiwan has never been studied in detail, even our small starting dataset from the single area in central Taiwan results in many new records for Taiwan at species, genus or even family levels. Below we concisely report these new records, despite the species-level taxonomic treatment of most of them requiring additional study. The material examined is only listed for taxa identified down to species, for genus-level records, it can be found in the Excel sheet with the complete data (Suppl. material
Carabidae
Oodes (Lachnocrepis) japonicus (Bates, 1873) (Licininae: Oodini)
Material examined. 1 female (
Comments. Multiple species and genera of the Oodini are reported from Japan or southern China (
Histeridae
Anapleus Horn, 1873 (Dendrophilinae: Anapleini)
Comments. The genus was first recorded from Taiwan by
Leiodidae
Dermatohomoeus sp.
Material examined. 4 females (ZSPC): Taiwan: Nantou County Huisun Forest reserve, track to Xiaochushan Mt., 24.0744602°N, 121.0366337°E, 1150 m, 24.ii.2020, F.S. Hu lgt., primary forest on the slope with sparse understory: sifting of small leaf accumulations (incl. DNA voucher 20-02HS511); 17 females (ZSPC): same locality, 20.vi.2020, F.S. Hu lgt. (incl. DNA voucher 20-06HS519); 31 females (ZSPC): same locality, 11.x.2020, F.S. Hu & Y.J. Chen lgt. (incl. DNA voucher 20-10HS521); 19 females (ZSPC): same locality, 16.viii.2021, M. Fikáček & W.R. Liang lgt. (incl. voucher 21-08HS526); 1 female (ZSPC): same locality, 1.iii.2021, M. Fikáček, F.S. Hu & G.J. Peng lgt. (voucher 21-03HS507); 10 females (ZSPC): same locality, 4.v.2019, M. Fikáček, F.S. Hu, A. Damaska & H.C. Liu lgt. (incl. DNA voucher HS1020); 4 females (ZSPC): Taiwan: Nantou County, Huisun Forest reserve, track to Xiaochushan Mt., 24.0847025°N, 121.0274161°E, 1000 m, 16.viii.2021, mixed Cryptomeria + sparse broadleaf forest on the slope, 16.viii.2021, M. Fikáček & W.R. Liang lgt. (incl. DNA voucher 21-08HS339); 1 female (ZSPC): same locality, 20.vi.2020, F.S. Hu lgt. (voucher 20-06HS317); 1 female (ZSPC): same locality, 11.x.2020, F.S. Hu & Y.J.Chen lgt. (voucher 20-10HS310); 8 females (ZSPC): Taiwan: Nantou County, Huisun Forest Reserve, Xiaochushan Mt. track, 0.5 km above hotels 24.0887444°N, 121.0355063°E, 850 m, 4.v.2019; Damaška, Fikáček, Hu & Liu lgt.; large accumulations of leaf litter in a small gorge with lower montane/lowland broad-leaf forest (incl. voucher HS4031); 2 females (ZSPC): Taiwan: Nantou County, Huisun Forest res., Wading trail, 24.0892139°N, 121.0297836°E, 700 m, 28.ii.2020, F.S. Hu & Y.J. Chen lgt., stony forest on the slope, small leaf accumulations (incl. DNA voucher 21-03HS120); 1 female (ZSPC): same locality, 5.v.2019, M. Fikáček, F.S. Hu, A. Damaska & H.C. Liu lgt. (DNA voucher HS5013).
Comments. The genus is newly recorded from Taiwan in the present paper. The previous records of the genus from Taiwan are based on the transfer of Colenisia miyatakei (Hisamatsu, 1985) to the Dermatohomoeus by
Staphylinidae
Drusilla obliqua (Bernhauer, 1916) (Aleocharinae: Lomechusini)
Material examined. 12 spec. (FSHC,
Comments. Drusilla obliqua is a widespread species; it has been recorded from India, Nepal, Myanmar, China (Yunnan), Vietnam and Malaysia (
Paraploderus cf. thailandicus Makranczy, 2016 (Oxytelinae: Thinobiini)
Fig.
Material examined. 16 spec. (
Comments. The genus is newly recorded from Taiwan in the present paper. György Makranczy examined the specimens of this Paraploderus species from Taiwan already earlier, based on the material collected by S. Vít deposited in MHNG (see under Material examined). The male genitalia of these specimens (Fig.
Thinocharis Kraatz, 1859 (Paederinae: Lathrobiini)
Comments. The genus is newly recorded from Taiwan in the present paper. The species identification will need to be done in the future.
Tribe Trichonychini (Pselaphinae)
Comments. The tribe is newly recorded from Taiwan in the present paper, as well as the supertribe Euplectitae. There are at least two species in our samples. A generic revision of the Trichonychini needs to be done before the confirmation of the generic identifications.
Tribe Ctenistini (Pselaphinae)
Comments. The tribe is here newly recorded from Taiwan. The generic revision of the Ctenistini needs to be done before the confirmation of the generic identifications.
Tribe Bythinoplectini (Pselaphinae)
Comments. The tribe, as well as the supertribe Euplectitae, are newly recorded from Taiwan here. There are at least two species in our samples.
Batraxis Reitter, 1882 (Pselaphinae: Brachyglutini)
Comments. The genus was listed for Taiwan in the Catalogue of Life, based on the occurrence of B. obesa Raffray, 1894 (
Cephennodes Reitter, 1884 (Scydmaeninae: Cephenniini)
Comments. The genus is newly recorded from Taiwan in the present paper. The species identification will be done in the future.
Napoconnus Franz, 1957 (Scydmaeninae: Stenichnini)
Comments. The genus has been newly recorded from Taiwan in the present paper. The species identification will need to be done in the future.
Cerylonidae
Thyroderus porcatus Sharp, 1885 (Ceryloninae)
Material examined. 2 spec. (FSHC,
Comments. The species was only known from Japan previously (
Cautomus Sharp, 1885 (Ceryloninae)
Comments. The genus is newly recorded from Taiwan in this study based on two species from the Huisun Forest Reserve. Both species differ both by the DNA barcode sequences and morphologically. The species identification will be done in the future.
Sphindidae
Aspidiphorus Ziegler, 1821
Comments. The family and genus are newly recorded from Taiwan. There are two species in our Huisun samples identified by the DNA barcode sequences; their species identification needs to be done in the future.
Latridiidae
Bicava Belon, 1884
Comments. The genus is newly recorded from Taiwan in the present paper. The species identification will be done in the future.
Cartodere sp.
Comments. The genus was first recorded from Taiwan by
Curculionidae
Otibazo Morimoto, 1961
Comments. The genus is newly recorded from Taiwan in the present paper. An extensive taxonomic study on this genus in Taiwan is in preparation and will be published in the near future (Wei-Zhe Tseng, in prep.).
Seleuca Pascoe, 1871
Comments. The genus is newly recorded from Taiwan in the present paper. The species identification needs to be completed in the future.
Acallinus Morimoto, 1962
Comments. The genus is newly recorded from Taiwan in the present paper. Based on the DNA barcodes, the samples reported here (Taiwan: Nantou County, Huisun Forest Reserve) contain two or three species. The species identification needs to be done in the future.
Coccotrypes advena Blandford, 1894
Material examined. 1 female (
Comments. This is a generalist seed-boring scolytine species widespread in SE Asia, Australia and Oceania, America from Florida through the Caribbean to Suriname (
Examples of larvae associated with adults
Carabidae
Oodes (Lachnocrepis) japonicus (Bates, 1873) (Licininae: Oodini)
Fig.
Material examined. Larvae: 1 larva (
Carabidae: Oodini: larva of Oodes (Lachnocrepis) japonicus (Bates, 1873) (OTU159, voucher 20-08HS350) associated with adults by DNA. A, B. Head (A. Dorsal view; B. Ventral view); C. Middle and hind legs; D. Nasale and mandibles, dorsal view; E. Antenna, dorsal view; F. Mouthparts, ventral view; G, H. Abdominal apex (G. Dorsal view; H. Ventral view).
Comments. The knowledge on larval morphology of the Oodini is quite limited so far, with larvae of several species of Oodes Bonelli, 1810 described and illustrated (
Perigona cf. nigriceps Dejean, 1831 (Lebiinae: Perigonini)
Fig.
Material examined. Larvae: 2 larvae (
Comments. Perigona Laporte, 1835 is a species-rich world-wide genus (e.g.,
Ptilodactylidae: Ptilodactylinae
Ptilodactyla sp.
Fig.
Material examined. Larvae: 3 larvae (
Comments. Larvae of Ptilodactyla Illiger, 1807 have been mentioned and illustrated by numerous authors (e.g.,
Ptilodactylidae: larva of Ptilodactyla sp. (OTU83, voucher 20-02HS155) associated with adults by DNA. A. Head and thorax in dorsal view; B. Head, ventral view; C. Head, lateral view; D. Anterior part of the head, dorsal view; E. Detail of labrum; F. Antenna in lateral view; G. Front and middle leg.
Cantharidae: Malthininae
Maltypus ryukyuanus Wittmer, 1970 (Malthodini)
Fig.
Material examined. Larva: 1 larva (
Cantharidae: larva of Maltypus ryukyuanus (OTU66, voucher HS4055L) associated with adults by DNA. A. Head and pro- and mesothorax, ventral view; B. Head, dorsal view; C. Detail of anterior part of the head, dorsal view; D. Detail of the head surface, with smooth anterior and sculptured posterior part; E. Antenna; F. Front leg.
Comments. In Malthininae, larvae are only known for two genera, Malthinus Latreille, 1806 (Malthinini) and Malthodes Kiesenwetter, 1852 (Malthodini), with the data about their morphology are scattered.
Staphylinidae
Aleocharinae
Drusilla obliqua (Bernhauer, 1916) (Lomechusini)
Fig.
Material examined. Larvae: 2 larvae (
Staphylinidae: Aleocharinae: Lomechusini: larva of Drusilla obliqua. (OTU216, voucher 21-08HS152) associated with adults by DNA. A. Dorsal habitus; B–F. Head: B. Dorsal view; C. Ventral view; D. Details of anterior part in dorsal view; E. Maxilla; F. Labium; G. Abdominal apex in ventral view; H. Hind legs.
Comments. Larvae of two species of Drusilla Leach, 1819 have been described: Drusilla canaliculata (Fabricius, 1787) (
Myrmecocephalus brevisulcus (Pace, 2008) (Falagriini)
Fig.
Material examined. Larvae: 1 larva (
Staphylinidae: Aleocharinae: Falagriini: larva of Myrmecocephalus brevisulcus (OTU84, voucher 20-06HS573) associated with adults by DNA. A. Head and prothorax in ventral view; B. Head in dorsal view; C. Clypeus, labrum and mandibles in dorsal view; D. Mouthparts in ventral view; E. Antenna; F. Thorax in dorsal view; G. Hind leg; H. Abdominal apex.
Comments. Larvae of several genera of Falagriini have been described or illustrated, including Cordalia Jacobs, 1925, Falagria Leach, 1819 and Myrmecopora Saulcy, 1864 (
Staphylininae
Diochus sp. (Diochini)
Fig.
Material examined. Larva: 1 larva (
Staphylinidae: Staphylininae: Diochini: larva of Diochus sp. (OTU206, voucher 20-08HS182) associated with adults by DNA. A–D. Head: A. Dorsal view; B. Ventral view; C. Details of anterior part in ventral view; D. Antenna; E. Thorax in dorsal view; F. Fore leg; G. Apex of abdomen in lateral view.
Comments. The tribe Diochini contains two genera: Antarctothius Coiffait & Sáiz, 1969 and Diochus Erichson, 1839; the larva of Antarctothius is unknown. The larva of the American Diochus schaumii Kraatz, 1860 is currently the only known larva in the tribe; it has been mentioned in the phylogenetic study by
Paederinae
Mimopinophilus sp. (Pinophilini)
Fig.
Material examined. Larvae: 1 larva (
Staphylinidae: Paederinae: Pinophilini: larva of Mimopinophilus sp. (OTU271, vouchers 21-08HS346 and 21-08HS568) associated with adults by DNA. A. Head and anterior part of thorax, dorsal view; B. Maxilla; C. Antenna; D. Nasale; E. Eye in lateral view; F. Labium; G. End of the abdomen with urogomphi, dorsal view; H. Front legs.
Comments. The larvae of Pinophilini are poorly understood (
Nitidulidae
Stelidota multiguttata Reitter, 1877
Fig.
Material examined. Larvae: 1 larva (
Nitidulidae. A–G. Late instar larva of Stelidota multiguttata (OTU119, voucher 21-08H158); H–M. Early instar larva of Lasiodites inaequalis (OTU180, voucher 20-08HS172). A, I. Habitus in dorsal view; B. Abdominal apex in lateral view; C. Head in dorsal view; D, K. Antenna; E. L. Mouthparts in ventral view; F. Head and thorax in ventral view; G, M. Detail of leg; H, N. End of abdomen in dorsal view; K. Detail of antenna and mandible in dorsal view.
Comments. The larvae of Nearctic species, Stelidota geminata (Say, 1825), S. ferruginea Reitter, 1873 and S. octomaculata (Say, 1825), have been described (
Lasiodites inaequalis (Grouvelle, 1914)
Fig.
Material examined. Larva: 1 spec. (
Comments. Although the larvae of the invasive Lasiodites picta are sometimes reported in literature (e.g.,
Tenebrionidae: Lagriinae
Lagria scutellaris Pic, 1910 (Lagriini)
Fig.
Material examined. Larvae: 1 larva (
Tenebrionidae: Lagriinae: Lagriini: larvae of Lagria scutellaris (OTU174) associated with adults by DNA. A–C. Habitus of late instar larva (voucher 20-10HS556; A. Dorsal; B. Lateral; C. Ventral); D, E. Head of the late instar larva (voucher 21-08HS163; D. Dorsal; E. Ventral); F–H. Early instar larva (voucher HS5060L): F. Mouthparts, ventral view; G. Hind leg; H. Head and thorax in dorsal view.
Huisun Forest reserve, Wading trail, 24.0892139°N, 121.0297836°E, 700m, 5.v.2019, Damaška, Fikáček, Hu & Liu lgt., stony forest on the slope, small leaf accumulations (2019-TW18) (voucher HS5060L); 1 larva (
Comments. Although some species of Lagria Fabricius, 1775 are recognized as pests and are also used as model organisms and their life cycle is hence well known and studied (e.g.,
Anaedus spinicornis Kaszab, 1973 (Goniaderini)
Fig.
Material examined. Larvae: 1 larva (
Comments. The larva of American Anaedus brunneus (Ziegler, 1844) has been illustrated without a detailed description (
The dataset published here is based on 20 samples collected in 2019–2021 in a single forest reserve in central Taiwan, and is hence limited geographically. Still, it illustrates challenges of studies on subtropical and tropical leaf litter beetle faunas: we sorted 4629 specimens that represent 334 species of 36 beetle families. It also demonstrates that the integrative approach combining DNA barcodes and morphology makes the study of largely unknown but species-diverse fauna more efficient. DNA barcodes allowed us to sort the material to species candidates for all groups, including taxonomically difficult ones or those for which taxonomic experts are not available at the moment. We were also able to sort larval specimens into species and associate part of them with co-occurring adults. This task would be impossible using morphology (see
The contribution of experts on taxonomy of particular groups is crucial for our project, providing the bridge between the DNA-based ‘species candidates’ (called OTU or MOTU in general, and BIN in the BOLD database) and taxonomic species with associated knowledge about morphology, lifestyle and evolutionary history. Although ecological studies may be based purely on numbers of unnamed species estimated by hand-sorting (e.g.,
We explicitly declare that our aim is not to support the DNA-only systematics proposed recently in some insect studies (e.g.,
The DNA barcodes, new faunistic records and the first taxonomic conclusions reported here are the first results of the Taiwanese Leaf Litter Beetles project. Voucher specimens for all DNA sequences published here, as well as the non-sequenced conspecific specimens from the same samples, are available for further studies by experts, e.g. those focused on particular genera and their larvae (e.g.,
We are grateful to Wei-Ren Liang (The Kyushu University Museum, Japan), Hsing-Che Liu (Taichung, Taiwan), and Yu-Jing Chen (Taichung, Taiwan) for their company and assistance with sample collecting. We are deeply indebted to Jen-Pan Huang (Biodiversity Research Centre, Academia Sinica, Taiwan) for providing his lab and massive support and encouragement for this project, and to Yi-Hsiu Kuan, Ming-Hsu Chou and Zong-Yu Shen from the same lab for lab support and discussions. Volker Assing (deceased), Ching-Shan Lin (Taichung, Taiwan), Paweł Jałoszyński (University of Wroclaw, Poland), Hiroshi Sugaya (Nantou, Taiwan), Mateusz Sapieja (University of Wroclaw, Poland), Shih-Pi Kao (Taichung, Taiwan), Wei-Ren Liang (Kyushu University, Japan), Adam Ślipiński (Australian National Insect Collection, Canberra), Chi-Feng Lee (Taiwan Agriculture Research Institute, Taichung), Jan Růžička (Czech University of Life Sciences Prague, Czech Republic), and Manfred Uhlig (Museum für Naturkunde, Berlin, Germany), and Hume Douglas (Agriculture and Agri-Food Canada, Ottawa, Canada) helped with the identifications of part of the DNA-barcoded specimens. The data presented in this study were generated under the support by the Taiwanese National Science and Technology Council projects MOST 110-2621-B-110-001 and MOST 111-2621-B-110-003. The initial step of the project and the visit of Fang-Shuo Hu to Prague in 2019 was possible thanks to European Commission’s SYNTHESYS project CZ-TAF-2524. The work in the National Museum, Prague was supported by the Ministry of Culture of the Czech Republic (DKRVO 2019–2023/5.I.e, National Museum, 00023272). The work of Gabriel Biffi was supported by Vale Institute of Technology and Fundação Guamá (Pará, Brazil). The project was partly funded by the SVV 260686/2023 grant to AFD.
Below, we are listing all taxa recorded in the dataset published in this study which are currently identified to genus or species levels. For details about the number of OTUs in the genera listed, the collecting details of all taxa, and their DNA barcodes, please refer to the Suppl. material
Anthicidae: Sapintus plectilis, Macrotomoderus sp. Archeocrypticidae: Sivacrypticus taiwanicus. Bothrideridae: Antibothrus sp. Cantharidae: Maltypus ryukyuanus. Carabidae: Trichotichnus sp., Lebia sp., Pentagonica subcordicollis, Perigona cf. nigriceps, Oodes japonicus, Rhyzodiastes rimoganensis, Trilophus cf. alternans. Cerambycidae: Pterolophia laterialba. Cerylonidae: Cautomus sp., Gyrelon jenpani, Thyroderus porcatus. Chrysomelidae: Ivalia sp., Aphtona sp., Clavicornaltica sp., Trachytetra takizawai, Smaragdina nigripennis, Xanthonia taiwana, Morphosphaera sp., Paleosepharia sp. Cleridae: Omadius zebratus. Curculionidae: Trachyphloeosoma sp., Phaeopholus ornatus, Otibazo sp., Acallinus sp., Seleuca sp., Coccotrypes advena, Coccotrypes papuanus, Coccotrypes longior, Orthotomicus sp., Microperus sp., Hypothenemus eruditus, Xyleborinus saxesenii. Discolomatidae: Aphanocephalus sp. Elateridae: Adelocera cf. shirozui, Cardiotarsus sp., Ryukyucardiophorus babai, Csikia dimatoides, Neopsephus sp. Endomychidae: Mycetina sp., Chondria nigropunctata, Ectomychus tappanus. Erotylidae: Cryptophilus sp., Neosternus sp. Histeridae: Anapleus sp., Margarinotus curvicollis, Tribalus sp. Hydrophilidae: Anacaena sp., Armostus sp., Psalitrus sp. Lampyridae: Luciola kagiana. Latrididae: Bicava sp., Cartodere sp. Leiodidae: Ptomaphaginus sp., Agathidium amictum, Agathidium pictum, Dermatohomoeus sp. Lycidae: Macrolycus sp. Melandryidae: Lederina sp. Meloidae: Epicauta sp. Nitidulidae: Lasiodites inaequalis, Lasiodites pictus, Stelidota multiguttata. Phalacridae: gen. sp. Prionoceridae: Idgia sp. Ptiliidae: genn. spp. Ptilodactylidae: Ptilodactyla sp. Ptinidae: Myrmecoptinus sp. Scarabaeidae: Oxyomus alligator, Rhyparus azumai, Onthophagus yangi. Scraptiidae: gen. sp. Sphindidae: Aspidiphorus sp. Staphylinidae: Aleocharinae: Aleochara sp., Myrmecocephalus brevisulcus, Gyrophaena sp., Drusilla obliqua, Orphnebius sp., Zyras formosae. Euasthethinae: Edaphus cf. taiwanensis, Stenaesthetus nomurai. Mycetoporinae: Ischnosoma duplicatum, Ischnosoma quadriguttatum, Lordithon sp. Osoriinae: Thoracochirus sp., Arpagonus sp., Osorius cf. huangi, Nacaeus sp. Oxytelinae: Anotylus cf. amicus, Anotylus cf. cimicoides, Paraploderus cf. thailandicus. Paederinae: Homaeotarsus sp., Astenus sp., Hypomedon debilicornis, Rugilus japonicus, Thinocharis sp., Mimopinophilus sp., Palaminus sp. Proteininae: Megarthrus sp. Pselaphinae: Harmophorus sp., Cratna sp., Physomerinus sp., Sathytes rufus, Batraxis sp., Reichenbachia sp., Plagiophorus amygdalinus, Morana sp., Pseudophanias excavatus, Pseudophanias yaimensis, Centrophthalmus sp., Horniella nantouensis, Horniella taiwanensis, Labomimus sp. Scaphidiinae: Baeocera caliginosa, Baeocera cooteri, Scaphisoma hui, Scaphobaeocera sp., Scaphoxium cf. taiwanum. Scydmaeninae: Cephennodes taurus species group, Cephennomicrus sp., Euconnus sp., Himaloconnus sp., Scydmaenus sp., Napoconnus sp. Staphylininae: Diochus sp., Erichsonius sp., Hesperopalpus venustus, Indoquedius sp., Philonthus sp., Tolmerinus sp. Steninae: Stenus sp. Tachyporinae: Coproporus cf. brunnicollis. Xantholininae: gen. sp. Tenebrionidae: Ades sp., Derispia cf. nanshanchiensis, Anaedus spinicornis, Lagria scutellaris, Stenochinus sp., Amarygmus cf. taiwanus. Zopheridae: Pseudotarphius lewisi.
Maximum likelhihood tree
Data type: pdf
Explanation note: The maximum likelhihood tree based on all DNA barcode sequences of the leaf litter beetles from the Huisun Forest Reserve, Taiwan.
The DNA barcodes of the leaf litter beetles from Huisun Forest Reserve and the associated metadata
Data type: xlsx